Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CAPN6Q9Y6Q1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 KRT8P3-201ENST00000519669 1449 ntBASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 AC233263.1-201ENST00000578059 224 ntBASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN6Q9Y6Q1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 AC069544.1-201ENST00000609399 999 ntBASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CAPN6Q9Y6Q1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 AC008556.1-201ENST00000610908 2040 ntBASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 AC112777.1-201ENST00000540175 1423 ntBASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN6Q9Y6Q1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 AC138028.4-201ENST00000564984 1845 ntBASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms