Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-206ENST00000376090 689 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-209ENST00000376096 565 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-210ENST00000376099 610 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 MIR564-202ENST00000385049 94 ntBASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-214ENST00000418507 726 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 MIR3180-5-201ENST00000583743 153 ntBASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB13Q9Y5F0 RNF165-205ENST00000588679 2904 ntBASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AL138781.2-201ENST00000617896 1843 ntBASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AC145285.6-201ENST00000604632 637 ntBASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB13Q9Y5F0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 ECEL1P2-202ENST00000465689 757 ntBASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB13Q9Y5F0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 FAM87A-204ENST00000613235 858 ntBASIC20.58■□□□□ 0.89
PCDHB13Q9Y5F0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHB13Q9Y5F0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms