Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NDE1Q9NXR1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NDE1Q9NXR1 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 RAP2CP1-201ENST00000605103 478 ntBASIC18.08■□□□□ 0.48
NDE1Q9NXR1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.08■□□□□ 0.48
NDE1Q9NXR1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 DUX4L16-201ENST00000555130 1264 ntBASIC18.07■□□□□ 0.48
NDE1Q9NXR1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NDE1Q9NXR1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 LSM12P1-201ENST00000411836 588 ntBASIC18.06■□□□□ 0.48
NDE1Q9NXR1 AL512625.2-201ENST00000417533 625 ntBASIC18.06■□□□□ 0.48
NDE1Q9NXR1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 AC005829.2-201ENST00000571422 1056 ntBASIC18.06■□□□□ 0.48
NDE1Q9NXR1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 NTF6G-201ENST00000591094 616 ntBASIC18.06■□□□□ 0.48
NDE1Q9NXR1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NDE1Q9NXR1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms