Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRRC4CQ9HCJ2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC080080.1-201ENST00000625121 2420 ntBASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC008550.1-201ENST00000511500 884 ntBASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 AC009053.2-201ENST00000563701 2365 ntBASIC19.17■□□□□ 0.66
LRRC4CQ9HCJ2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 AC073912.3-201ENST00000624414 853 ntBASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
LRRC4CQ9HCJ2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRRC4CQ9HCJ2 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms