Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AL596275.1-201ENST00000423464 877 ntBASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 TSPY7P-201ENST00000431358 1114 ntBASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLK4Q9HAZ1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 MESTP1-201ENST00000404287 994 ntBASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 REXO1L10P-201ENST00000615707 1290 ntBASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 REXO1L12P-201ENST00000622156 912 ntBASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 KRT8P41-201ENST00000533985 1514 ntBASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.18■□□□□ 0.5
CLK4Q9HAZ1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC011506.1-201ENST00000474329 610 ntBASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC011298.2-201ENST00000617989 482 ntBASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 AC006333.2-201ENST00000607957 2099 ntBASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLK4Q9HAZ1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 UNC93B2-201ENST00000285383 730 ntBASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 AC091390.4-202ENST00000476426 537 ntBASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 PRSS44-201ENST00000515154 1146 ntBASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 WIZP1-201ENST00000531444 2299 ntBASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
CLK4Q9HAZ1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms