Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 RPL18A-207ENST00000602216 907 ntTSL 219.67■□□□□ 0.745e-8■■■□□ 18
XRN2Q9H0D6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.66■□□□□ 0.741e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-215ENST00000452773 665 ntTSL 219.64■□□□□ 0.731e-5■■■□□ 18
XRN2Q9H0D6 SSBP4-213ENST00000602088 622 ntTSL 519.6■□□□□ 0.731e-5■■■□□ 18
XRN2Q9H0D6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.731e-5■■■□□ 18
XRN2Q9H0D6 WDR1-215ENST00000510848 554 ntTSL 419.58■□□□□ 0.721e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-224ENST00000489087 512 ntTSL 419.58■□□□□ 0.721e-5■■■□□ 18
XRN2Q9H0D6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.721e-5■■■□□ 18
XRN2Q9H0D6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.721e-5■■■□□ 18
XRN2Q9H0D6 WDR73-211ENST00000559452 1240 ntTSL 319.52■□□□□ 0.721e-5■■■□□ 18
XRN2Q9H0D6 WDR73-205ENST00000558521 997 ntTSL 319.51■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 WDR73-210ENST00000559224 788 ntTSL 519.51■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 WDR1-206ENST00000502962 1411 ntTSL 519.49■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-213ENST00000622389 853 ntTSL 519.48■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 TBCB-206ENST00000585910 656 ntTSL 219.46■□□□□ 0.711e-5■■■□□ 18
XRN2Q9H0D6 DMKN-226ENST00000465927 893 ntTSL 319.45■□□□□ 0.71e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-205ENST00000617260 931 ntTSL 519.43■□□□□ 0.71e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-202ENST00000525391 640 ntTSL 219.42■□□□□ 0.71e-5■■■□□ 18
XRN2Q9H0D6 DPH7-208ENST00000476303 922 ntTSL 1 (best)19.41■□□□□ 0.71e-5■■■□□ 18
XRN2Q9H0D6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.691e-5■■■□□ 18
XRN2Q9H0D6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.33■□□□□ 0.681e-5■■■□□ 18
XRN2Q9H0D6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.681e-5■■■□□ 18
XRN2Q9H0D6 PCNX3-205ENST00000531280 472 ntTSL 519.3■□□□□ 0.681e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-219ENST00000614991 985 ntTSL 519.3■□□□□ 0.681e-5■■■□□ 18
XRN2Q9H0D6 IPO4-208ENST00000559253 579 ntTSL 419.29■□□□□ 0.685e-8■■■□□ 18
XRN2Q9H0D6 LRP3-204ENST00000592484 575 ntTSL 419.24■□□□□ 0.671e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.17■□□□□ 0.661e-5■■■□□ 18
XRN2Q9H0D6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.12■□□□□ 0.651e-5■■■□□ 18
XRN2Q9H0D6 TRIM28-206ENST00000595974 665 ntTSL 319.11■□□□□ 0.651e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-206ENST00000503660 1071 ntTSL 519.07■□□□□ 0.641e-5■■■□□ 18
XRN2Q9H0D6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.06■□□□□ 0.641e-5■■■□□ 18
XRN2Q9H0D6 WDR45B-208ENST00000574828 765 ntTSL 319.05■□□□□ 0.641e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.03■□□□□ 0.641e-5■■■□□ 18
XRN2Q9H0D6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.631e-5■■■□□ 18
XRN2Q9H0D6 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)18.96■□□□□ 0.633e-7■■■□□ 18
XRN2Q9H0D6 ZNF202-205ENST00000529250 541 ntTSL 218.96■□□□□ 0.631e-5■■■□□ 18
XRN2Q9H0D6 ZNF202-208ENST00000530944 585 ntTSL 518.96■□□□□ 0.631e-5■■■□□ 18
XRN2Q9H0D6 TRIM28-213ENST00000598355 714 ntTSL 218.95■□□□□ 0.621e-5■■■□□ 18
XRN2Q9H0D6 LZTR1-216ENST00000495142 720 ntTSL 318.93■□□□□ 0.625e-8■■■□□ 18
XRN2Q9H0D6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.621e-5■■■□□ 18
XRN2Q9H0D6 DPH7-202ENST00000460572 394 ntTSL 518.82■□□□□ 0.61e-5■■■□□ 18
XRN2Q9H0D6 C15orf40-212ENST00000565725 541 ntTSL 218.78■□□□□ 0.61e-5■■■□□ 18
XRN2Q9H0D6 TCF3-208ENST00000586318 631 ntTSL 318.77■□□□□ 0.61e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-220ENST00000600501 793 ntTSL 518.7■□□□□ 0.581e-5■■■□□ 18
XRN2Q9H0D6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.68■□□□□ 0.581e-5■■■□□ 18
XRN2Q9H0D6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.67■□□□□ 0.581e-5■■■□□ 18
XRN2Q9H0D6 IST1-225ENST00000568581 503 ntTSL 518.66■□□□□ 0.581e-5■■■□□ 18
XRN2Q9H0D6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.583e-9■■■□□ 18
XRN2Q9H0D6 BTBD19-206ENST00000482715 558 ntTSL 418.66■□□□□ 0.582e-15■■■□□ 18
XRN2Q9H0D6 SLC23A3-209ENST00000465580 510 ntTSL 418.65■□□□□ 0.581e-5■■■□□ 18
XRN2Q9H0D6 CERS4-212ENST00000561008 531 ntTSL 418.63■□□□□ 0.571e-5■■■□□ 18
XRN2Q9H0D6 AL157392.3-225ENST00000612515 813 ntTSL 518.59■□□□□ 0.571e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-210ENST00000497918 2221 ntTSL 218.57■□□□□ 0.561e-5■■■□□ 18
XRN2Q9H0D6 RRP1-205ENST00000483896 805 ntTSL 318.56■□□□□ 0.561e-5■■■□□ 18
XRN2Q9H0D6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.561e-5■■■□□ 18
XRN2Q9H0D6 RNF220-214ENST00000484745 1951 ntTSL 518.52■□□□□ 0.561e-5■■■□□ 18
XRN2Q9H0D6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.51■□□□□ 0.551e-5■■■□□ 18
XRN2Q9H0D6 QTRT1-210ENST00000592254 539 ntTSL 318.51■□□□□ 0.551e-5■■■□□ 18
XRN2Q9H0D6 CPSF1-211ENST00000533492 510 ntTSL 518.51■□□□□ 0.551e-5■■■□□ 18
XRN2Q9H0D6 UNKL-214ENST00000515195 481 ntTSL 418.49■□□□□ 0.551e-6■■■□□ 18
XRN2Q9H0D6 AL157392.3-222ENST00000613332 738 ntTSL 518.48■□□□□ 0.551e-5■■■□□ 18
XRN2Q9H0D6 DPH7-206ENST00000472113 1414 ntTSL 518.46■□□□□ 0.551e-5■■■□□ 18
XRN2Q9H0D6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.546e-7■■■□□ 18
XRN2Q9H0D6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.531e-5■■■□□ 18
XRN2Q9H0D6 MOB1A-202ENST00000463975 1799 ntTSL 218.29■□□□□ 0.522e-10■■■□□ 18
XRN2Q9H0D6 SH3TC1-220ENST00000511002 1124 ntTSL 518.27■□□□□ 0.525e-8■■■□□ 18
XRN2Q9H0D6 WDR1-210ENST00000506246 572 ntTSL 518.27■□□□□ 0.521e-5■■■□□ 18
XRN2Q9H0D6 WDR1-207ENST00000504739 555 ntTSL 318.27■□□□□ 0.521e-5■■■□□ 18
XRN2Q9H0D6 CHRD-208ENST00000460627 4719 ntTSL 218.23■□□□□ 0.515e-6■■■□□ 18
XRN2Q9H0D6 AL157392.3-210ENST00000613467 780 ntTSL 518.21■□□□□ 0.511e-5■■■□□ 18
XRN2Q9H0D6 SLC23A3-202ENST00000409370 785 ntTSL 318.2■□□□□ 0.51e-5■■■□□ 18
XRN2Q9H0D6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.491e-5■■■□□ 18
XRN2Q9H0D6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.491e-5■■■□□ 18
XRN2Q9H0D6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.491e-5■■■□□ 18
XRN2Q9H0D6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.08■□□□□ 0.491e-5■■■□□ 18
XRN2Q9H0D6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.08■□□□□ 0.485e-8■■■□□ 18
XRN2Q9H0D6 G3BP2-205ENST00000502654 546 ntTSL 418.06■□□□□ 0.481e-5■■■□□ 18
XRN2Q9H0D6 G3BP2-219ENST00000515457 560 ntTSL 418.06■□□□□ 0.481e-5■■■□□ 18
XRN2Q9H0D6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.471e-5■■■□□ 18
XRN2Q9H0D6 RNF19A-204ENST00000519342 562 ntTSL 417.98■□□□□ 0.471e-5■■■□□ 18
XRN2Q9H0D6 WDR1-212ENST00000508949 552 ntTSL 417.98■□□□□ 0.471e-5■■■□□ 18
XRN2Q9H0D6 CSNK1D-212ENST00000580061 578 ntTSL 317.92■□□□□ 0.462e-10■■■□□ 18
XRN2Q9H0D6 DPH7-212ENST00000485189 797 ntTSL 317.9■□□□□ 0.461e-5■■■□□ 18
XRN2Q9H0D6 PKD1-235ENST00000568591 2545 ntTSL 217.88■□□□□ 0.451e-5■■■□□ 18
XRN2Q9H0D6 LZTR1-210ENST00000464807 566 ntTSL 217.85■□□□□ 0.455e-8■■■□□ 18
XRN2Q9H0D6 SH3TC1-223ENST00000513495 600 ntTSL 417.83■□□□□ 0.445e-8■■■□□ 18
XRN2Q9H0D6 MOB1A-203ENST00000488006 482 ntTSL 317.81■□□□□ 0.442e-10■■■□□ 18
XRN2Q9H0D6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.445e-8■■■□□ 18
XRN2Q9H0D6 IPO4-202ENST00000557996 530 ntTSL 417.78■□□□□ 0.445e-8■■■□□ 18
XRN2Q9H0D6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.435e-6■■■□□ 18
XRN2Q9H0D6 NINL-205ENST00000464285 1514 ntTSL 217.74■□□□□ 0.435e-8■■■□□ 18
XRN2Q9H0D6 SLC23A3-206ENST00000430764 559 ntTSL 417.71■□□□□ 0.431e-5■■■□□ 18
XRN2Q9H0D6 DDX41-201ENST00000330503 2137 ntTSL 1 (best)17.7■□□□□ 0.421e-5■■■□□ 18
XRN2Q9H0D6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.7■□□□□ 0.422e-10■■■□□ 18
XRN2Q9H0D6 LZTR1-205ENST00000439171 635 ntTSL 517.63■□□□□ 0.415e-8■■■□□ 18
XRN2Q9H0D6 SREK1-212ENST00000522912 2047 ntTSL 1 (best)17.61■□□□□ 0.411e-5■■■□□ 18
XRN2Q9H0D6 WDR45B-206ENST00000573616 896 ntTSL 517.57■□□□□ 0.41e-5■■■□□ 18
XRN2Q9H0D6 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)17.57■□□□□ 0.41e-7■■■□□ 18
XRN2Q9H0D6 ARAP1-216ENST00000542596 699 ntTSL 517.55■□□□□ 0.41e-5■■■□□ 18
Retrieved 100 of 21,068 protein–RNA pairs in 31.3 ms