Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 PCDHB19P-201ENST00000570871 2371 ntBASIC15.16■□□□□ 0.02
NKX6-2Q9C056 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 SLC25A6P5-201ENST00000435663 894 ntBASIC15.15■□□□□ 0.02
NKX6-2Q9C056 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 AL356652.1-201ENST00000615962 565 ntBASIC15.15■□□□□ 0.02
NKX6-2Q9C056 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 KRT8P17-201ENST00000453110 1448 ntBASIC15.15■□□□□ 0.02
NKX6-2Q9C056 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 PCDHA1-201ENST00000378133 2726 ntBASIC15.15■□□□□ 0.02
NKX6-2Q9C056 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-2Q9C056 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 LINC00554-201ENST00000564841 3011 ntBASIC15.14■□□□□ 0.01
NKX6-2Q9C056 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 AL136116.3-201ENST00000402907 1138 ntBASIC15.14■□□□□ 0.01
NKX6-2Q9C056 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 ANO7L1-203ENST00000602586 1720 ntBASIC15.14■□□□□ 0.01
NKX6-2Q9C056 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX6-2Q9C056 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.13■□□□□ 0.01
NKX6-2Q9C056 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX6-2Q9C056 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms