Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.49■□□□□ 0.23
VRK1Q99986 AC010331.1-201ENST00000611423 582 ntBASIC16.49■□□□□ 0.23
VRK1Q99986 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.49■□□□□ 0.23
VRK1Q99986 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VRK1Q99986 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VRK1Q99986 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VRK1Q99986 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.49■□□□□ 0.23
VRK1Q99986 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VRK1Q99986 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VRK1Q99986 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 AL390961.4-201ENST00000623958 2535 ntBASIC16.48■□□□□ 0.23
VRK1Q99986 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 FAM207BP-201ENST00000447172 505 ntBASIC16.48■□□□□ 0.23
VRK1Q99986 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VRK1Q99986 AC130371.2-201ENST00000619443 611 ntBASIC16.48■□□□□ 0.23
VRK1Q99986 AC010947.1-201ENST00000623454 693 ntBASIC16.48■□□□□ 0.23
VRK1Q99986 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
VRK1Q99986 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
VRK1Q99986 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VRK1Q99986 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.48■□□□□ 0.23
VRK1Q99986 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
VRK1Q99986 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.47■□□□□ 0.23
VRK1Q99986 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.47■□□□□ 0.23
VRK1Q99986 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 AL160286.2-201ENST00000567150 934 ntBASIC16.47■□□□□ 0.23
VRK1Q99986 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 RN7SL850P-201ENST00000579959 291 ntBASIC16.47■□□□□ 0.23
VRK1Q99986 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 OR6D1P-202ENST00000641007 5290 ntBASIC16.47■□□□□ 0.23
VRK1Q99986 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
VRK1Q99986 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
VRK1Q99986 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 AC009237.14-201ENST00000609975 1594 ntBASIC16.47■□□□□ 0.23
VRK1Q99986 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
VRK1Q99986 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
VRK1Q99986 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.46■□□□□ 0.23
VRK1Q99986 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
VRK1Q99986 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms