Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE1Q99829 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE1Q99829 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.7■□□□□ 0.58
CPNE1Q99829 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.7■□□□□ 0.58
CPNE1Q99829 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE1Q99829 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE1Q99829 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.7■□□□□ 0.58
CPNE1Q99829 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CPNE1Q99829 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPNE1Q99829 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.69■□□□□ 0.58
CPNE1Q99829 CKBP1-201ENST00000565489 1086 ntBASIC18.69■□□□□ 0.58
CPNE1Q99829 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.69■□□□□ 0.58
CPNE1Q99829 AC011298.2-201ENST00000617989 482 ntBASIC18.69■□□□□ 0.58
CPNE1Q99829 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 AL031985.4-201ENST00000642138 673 ntBASIC18.69■□□□□ 0.58
CPNE1Q99829 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.69■□□□□ 0.58
CPNE1Q99829 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 RCC2P3-201ENST00000418112 1537 ntBASIC18.69■□□□□ 0.58
CPNE1Q99829 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPNE1Q99829 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPNE1Q99829 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE1Q99829 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CPNE1Q99829 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE1Q99829 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE1Q99829 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE1Q99829 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE1Q99829 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CPNE1Q99829 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPNE1Q99829 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CPNE1Q99829 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CPNE1Q99829 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 CR392000.1-201ENST00000624770 1228 ntBASIC18.67■□□□□ 0.58
CPNE1Q99829 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.67■□□□□ 0.58
CPNE1Q99829 AC068880.1-201ENST00000507289 2297 ntBASIC18.67■□□□□ 0.58
CPNE1Q99829 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE1Q99829 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE1Q99829 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms