Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PHF3Q92576 IER3-202ENST00000376377 1350 ntBASIC16.84■□□□□ 0.29
PHF3Q92576 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.84■□□□□ 0.29
PHF3Q92576 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.84■□□□□ 0.29
PHF3Q92576 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PHF3Q92576 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF3Q92576 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.84■□□□□ 0.29
PHF3Q92576 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PHF3Q92576 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.84■□□□□ 0.29
PHF3Q92576 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PHF3Q92576 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.84■□□□□ 0.29
PHF3Q92576 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF3Q92576 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.84■□□□□ 0.29
PHF3Q92576 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.84■□□□□ 0.29
PHF3Q92576 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.84■□□□□ 0.29
PHF3Q92576 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PHF3Q92576 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PHF3Q92576 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.83■□□□□ 0.29
PHF3Q92576 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
PHF3Q92576 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PHF3Q92576 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.83■□□□□ 0.28
PHF3Q92576 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 TSPY21P-201ENST00000433481 731 ntBASIC16.83■□□□□ 0.28
PHF3Q92576 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.83■□□□□ 0.28
PHF3Q92576 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 SPDYE13P-201ENST00000445314 798 ntBASIC16.83■□□□□ 0.28
PHF3Q92576 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.83■□□□□ 0.28
PHF3Q92576 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.83■□□□□ 0.28
PHF3Q92576 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.83■□□□□ 0.28
PHF3Q92576 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PHF3Q92576 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
PHF3Q92576 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
PHF3Q92576 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF3Q92576 GCSHP2-201ENST00000560971 527 ntBASIC16.82■□□□□ 0.28
PHF3Q92576 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.82■□□□□ 0.28
PHF3Q92576 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF3Q92576 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
PHF3Q92576 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF3Q92576 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF3Q92576 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF3Q92576 AL136038.3-201ENST00000561909 1096 ntBASIC16.82■□□□□ 0.28
PHF3Q92576 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.82■□□□□ 0.28
PHF3Q92576 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF3Q92576 AL512353.2-201ENST00000448759 1962 ntBASIC16.82■□□□□ 0.28
PHF3Q92576 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF3Q92576 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF3Q92576 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.81■□□□□ 0.28
PHF3Q92576 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHF3Q92576 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF3Q92576 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.81■□□□□ 0.28
PHF3Q92576 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF3Q92576 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHF3Q92576 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHF3Q92576 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms