Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF1Q8NEP3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
DNAAF1Q8NEP3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
DNAAF1Q8NEP3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
DNAAF1Q8NEP3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
DNAAF1Q8NEP3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
DNAAF1Q8NEP3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
DNAAF1Q8NEP3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 AC090192.1-201ENST00000517740 490 ntBASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
DNAAF1Q8NEP3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.43■□□□□ 0.22
DNAAF1Q8NEP3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms