Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 AC112907.2-201ENST00000448639 330 ntBASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 KRT18P38-201ENST00000449496 1282 ntBASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 TEX21P-204ENST00000641479 1693 ntBASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCDC155Q8N6L0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 ZNF815P-204ENST00000434898 1737 ntBASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 STARP1-201ENST00000397973 869 ntBASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC155Q8N6L0 KRT8P11-201ENST00000409686 1436 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SDHAP1-207ENST00000440850 2000 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 AL450487.1-201ENST00000426799 995 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ZNF444P1-201ENST00000559497 298 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 AL121894.2-201ENST00000602977 491 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC155Q8N6L0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 DUSP5P1-201ENST00000441325 1139 ntBASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC155Q8N6L0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCDC155Q8N6L0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC155Q8N6L0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC155Q8N6L0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms