Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CTSL3PQ5NE16 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 CR769767.2-201ENST00000622735 460 ntBASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.4■□□□□ 0.54
CTSL3PQ5NE16 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
CTSL3PQ5NE16 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 EGLN1P1-201ENST00000531623 762 ntBASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 BX088651.1-201ENST00000540551 451 ntBASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 NAPSB-206ENST00000562112 1266 ntBASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 MYC-208ENST00000641036 567 ntBASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CTSL3PQ5NE16 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 AC034236.2-201ENST00000606662 1610 ntBASIC18.38■□□□□ 0.53
CTSL3PQ5NE16 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.37■□□□□ 0.53
CTSL3PQ5NE16 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms