Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 KRT8P45-201ENST00000414328 1447 ntBASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 AC104771.1-201ENST00000603335 964 ntBASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.66■□□□□ 0.42
RUNDC3AQ59EK9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 KRT17P3-201ENST00000420566 1262 ntBASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 KRT16P5-201ENST00000455284 522 ntBASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 PRSS44-201ENST00000515154 1146 ntBASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 AC069544.1-201ENST00000609399 999 ntBASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RUNDC3AQ59EK9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.64■□□□□ 0.42
RUNDC3AQ59EK9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
RUNDC3AQ59EK9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RUNDC3AQ59EK9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 AL445675.2-201ENST00000620291 557 ntBASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RUNDC3AQ59EK9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms