Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
USP11P51784 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 ANO7L1-203ENST00000602586 1720 ntBASIC21.1■□□□□ 0.97
USP11P51784 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
USP11P51784 FAM8A6P-201ENST00000407496 1135 ntBASIC21.1■□□□□ 0.97
USP11P51784 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 HOMER2P1-201ENST00000455653 964 ntBASIC21.1■□□□□ 0.97
USP11P51784 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.1■□□□□ 0.97
USP11P51784 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.1■□□□□ 0.97
USP11P51784 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.1■□□□□ 0.97
USP11P51784 AL049597.2-201ENST00000565575 961 ntBASIC21.1■□□□□ 0.97
USP11P51784 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
USP11P51784 MYC-208ENST00000641036 567 ntBASIC21.1■□□□□ 0.97
USP11P51784 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 KRT8P50-201ENST00000562022 1438 ntBASIC21.1■□□□□ 0.97
USP11P51784 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.1■□□□□ 0.97
USP11P51784 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
USP11P51784 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
USP11P51784 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.09■□□□□ 0.97
USP11P51784 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.09■□□□□ 0.97
USP11P51784 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.09■□□□□ 0.97
USP11P51784 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.09■□□□□ 0.97
USP11P51784 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 TNXA-203ENST00000507684 2038 ntBASIC21.09■□□□□ 0.97
USP11P51784 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.09■□□□□ 0.97
USP11P51784 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP11P51784 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
USP11P51784 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.08■□□□□ 0.97
USP11P51784 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.08■□□□□ 0.97
USP11P51784 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.08■□□□□ 0.97
USP11P51784 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.08■□□□□ 0.97
USP11P51784 STARP1-201ENST00000397973 869 ntBASIC21.08■□□□□ 0.97
USP11P51784 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
USP11P51784 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.08■□□□□ 0.97
USP11P51784 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.08■□□□□ 0.97
USP11P51784 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.08■□□□□ 0.97
USP11P51784 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.08■□□□□ 0.97
USP11P51784 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP11P51784 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.08■□□□□ 0.97
USP11P51784 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP11P51784 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP11P51784 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP11P51784 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
USP11P51784 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP11P51784 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.08■□□□□ 0.96
USP11P51784 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP11P51784 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.08■□□□□ 0.96
USP11P51784 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
USP11P51784 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
USP11P51784 AC022616.7-201ENST00000525383 220 ntBASIC21.07■□□□□ 0.96
USP11P51784 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.07■□□□□ 0.96
USP11P51784 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
USP11P51784 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.07■□□□□ 0.96
USP11P51784 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP11P51784 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP11P51784 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP11P51784 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
USP11P51784 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms