Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 TSPY20P-201ENST00000450910 630 ntBASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 AC008764.6-201ENST00000595909 2069 ntBASIC16.81■□□□□ 0.28
HLA-DPB1P04440 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DPB1P04440 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 AC006058.3-201ENST00000606217 1069 ntBASIC16.8■□□□□ 0.28
HLA-DPB1P04440 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DPB1P04440 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 POU5F1P3-201ENST00000428824 1078 ntBASIC16.79■□□□□ 0.28
HLA-DPB1P04440 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 AC069544.1-201ENST00000609399 999 ntBASIC16.79■□□□□ 0.28
HLA-DPB1P04440 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DPB1P04440 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms