Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF40O75150 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RNF40O75150 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 HCG11-201ENST00000411553 5696 ntBASIC20.14■□□□□ 0.81
RNF40O75150 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF40O75150 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 TERF1P1-201ENST00000311003 1181 ntBASIC20.14■□□□□ 0.81
RNF40O75150 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 AL137013.1-201ENST00000432946 1228 ntBASIC20.14■□□□□ 0.81
RNF40O75150 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.14■□□□□ 0.81
RNF40O75150 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF40O75150 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF40O75150 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF40O75150 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.14■□□□□ 0.81
RNF40O75150 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.14■□□□□ 0.81
RNF40O75150 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RNF40O75150 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
RNF40O75150 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF40O75150 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF40O75150 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.13■□□□□ 0.81
RNF40O75150 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF40O75150 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.13■□□□□ 0.81
RNF40O75150 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RNF40O75150 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RNF40O75150 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.13■□□□□ 0.81
RNF40O75150 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RNF40O75150 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
RNF40O75150 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 SLC25A3P1-201ENST00000443844 931 ntBASIC20.12■□□□□ 0.81
RNF40O75150 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.12■□□□□ 0.81
RNF40O75150 AL031985.4-201ENST00000642138 673 ntBASIC20.12■□□□□ 0.81
RNF40O75150 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RNF40O75150 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RNF40O75150 AP006587.1-201ENST00000534129 1502 ntBASIC20.12■□□□□ 0.81
RNF40O75150 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RNF40O75150 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RNF40O75150 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RNF40O75150 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF40O75150 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF40O75150 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF40O75150 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RNF40O75150 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF40O75150 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF40O75150 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF40O75150 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RNF40O75150 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.11■□□□□ 0.81
RNF40O75150 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RNF40O75150 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.11■□□□□ 0.81
RNF40O75150 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RNF40O75150 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms