Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.83■□□□□ 0.44
RTCAO00442 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTCAO00442 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.83■□□□□ 0.44
RTCAO00442 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.82■□□□□ 0.44
RTCAO00442 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTCAO00442 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.82■□□□□ 0.44
RTCAO00442 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 AC005082.1-201ENST00000413042 2259 ntBASIC17.82■□□□□ 0.44
RTCAO00442 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.82■□□□□ 0.44
RTCAO00442 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.82■□□□□ 0.44
RTCAO00442 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
RTCAO00442 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTCAO00442 BX088651.1-201ENST00000540551 451 ntBASIC17.82■□□□□ 0.44
RTCAO00442 C2orf69P3-201ENST00000565542 1120 ntBASIC17.82■□□□□ 0.44
RTCAO00442 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.82■□□□□ 0.44
RTCAO00442 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 AC010947.1-201ENST00000623454 693 ntBASIC17.82■□□□□ 0.44
RTCAO00442 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.82■□□□□ 0.44
RTCAO00442 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.82■□□□□ 0.44
RTCAO00442 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.82■□□□□ 0.44
RTCAO00442 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RTCAO00442 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTCAO00442 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTCAO00442 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTCAO00442 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 AC126763.1-201ENST00000552015 2118 ntBASIC17.81■□□□□ 0.44
RTCAO00442 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 AC009113.1-201ENST00000570267 2443 ntBASIC17.81■□□□□ 0.44
RTCAO00442 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 SLC25A1P2-201ENST00000430693 912 ntBASIC17.81■□□□□ 0.44
RTCAO00442 MCCD1P1-208ENST00000445732 328 ntBASIC17.81■□□□□ 0.44
RTCAO00442 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RTCAO00442 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTCAO00442 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.81■□□□□ 0.44
RTCAO00442 AC092338.2-201ENST00000568827 1415 ntBASIC17.81■□□□□ 0.44
RTCAO00442 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RTCAO00442 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 AL109659.2-201ENST00000606809 1674 ntBASIC17.8■□□□□ 0.44
RTCAO00442 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
RTCAO00442 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.8■□□□□ 0.44
RTCAO00442 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.8■□□□□ 0.44
RTCAO00442 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.8■□□□□ 0.44
RTCAO00442 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.8■□□□□ 0.44
RTCAO00442 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 NAPSB-206ENST00000562112 1266 ntBASIC17.8■□□□□ 0.44
RTCAO00442 AL353719.1-201ENST00000566847 864 ntBASIC17.8■□□□□ 0.44
RTCAO00442 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RTCAO00442 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.8■□□□□ 0.44
RTCAO00442 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms