Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
DFFAO00273 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DFFAO00273 AL357033.4-201ENST00000617703 1807 ntBASIC19.21■□□□□ 0.67
DFFAO00273 AL109659.2-201ENST00000606809 1674 ntBASIC19.2■□□□□ 0.66
DFFAO00273 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DFFAO00273 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DFFAO00273 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.2■□□□□ 0.66
DFFAO00273 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
DFFAO00273 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.2■□□□□ 0.66
DFFAO00273 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
DFFAO00273 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DFFAO00273 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.2■□□□□ 0.66
DFFAO00273 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.2■□□□□ 0.66
DFFAO00273 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
DFFAO00273 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DFFAO00273 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DFFAO00273 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DFFAO00273 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 AL020996.1-203ENST00000536896 2307 ntBASIC19.19■□□□□ 0.66
DFFAO00273 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DFFAO00273 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.19■□□□□ 0.66
DFFAO00273 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.19■□□□□ 0.66
DFFAO00273 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 AC010653.2-201ENST00000623505 997 ntBASIC19.19■□□□□ 0.66
DFFAO00273 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DFFAO00273 AC036111.1-201ENST00000533973 1582 ntBASIC19.19■□□□□ 0.66
DFFAO00273 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.19■□□□□ 0.66
DFFAO00273 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.18■□□□□ 0.66
DFFAO00273 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.18■□□□□ 0.66
DFFAO00273 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.18■□□□□ 0.66
DFFAO00273 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.18■□□□□ 0.66
DFFAO00273 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.18■□□□□ 0.66
DFFAO00273 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.18■□□□□ 0.66
DFFAO00273 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
DFFAO00273 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
DFFAO00273 FAM87A-204ENST00000613235 858 ntBASIC19.18■□□□□ 0.66
DFFAO00273 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.18■□□□□ 0.66
DFFAO00273 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 KRT18P22-201ENST00000402024 1347 ntBASIC19.18■□□□□ 0.66
DFFAO00273 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.18■□□□□ 0.66
DFFAO00273 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DFFAO00273 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DFFAO00273 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.17■□□□□ 0.66
DFFAO00273 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DFFAO00273 MIR3180-5-201ENST00000583743 153 ntBASIC19.17■□□□□ 0.66
DFFAO00273 AC145285.6-201ENST00000604632 637 ntBASIC19.17■□□□□ 0.66
DFFAO00273 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DFFAO00273 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.17■□□□□ 0.66
DFFAO00273 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.17■□□□□ 0.66
DFFAO00273 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DFFAO00273 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms