Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 MIR6786-201ENST00000616843 113 ntBASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 KRT8P11-201ENST00000409686 1436 ntBASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 AC093503.3-201ENST00000624917 2352 ntBASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.44□□□□□ -0.26
TRGV4A0A0C4DH28 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TMEM191A-211ENST00000637163 1067 ntBASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 PKD1P5-201ENST00000532415 10291 ntBASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRGV4A0A0C4DH28 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 MIR718-201ENST00000390190 70 ntBASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 RPS2P55-201ENST00000397318 883 ntBASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 AL355355.2-201ENST00000442321 338 ntBASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 AC107956.1-201ENST00000494359 873 ntBASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 AP006294.2-201ENST00000641667 209 ntBASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRGV4A0A0C4DH28 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms