Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COMMD4Q9H0A8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COMMD4Q9H0A8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 HEIH-201ENST00000623091 1652 ntBASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COMMD4Q9H0A8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COMMD4Q9H0A8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms