Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ZNF815P-204ENST00000434898 1737 ntBASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LCE3DQ9BYE3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FST-202ENST00000396947 2538 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NORAD-201ENST00000565493 5339 ntBASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC073592.3-201ENST00000625118 1834 ntBASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC008764.6-201ENST00000595909 2069 ntBASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LCE3DQ9BYE3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms