Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 AL355802.2-201ENST00000402069 882 ntBASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 PRSS44-201ENST00000515154 1146 ntBASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 ESPNP-201ENST00000270691 2015 ntBASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC44A1Q8WWI5 AC093677.2-201ENST00000600169 1863 ntBASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 AC069544.1-201ENST00000609399 999 ntBASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 AL445675.2-201ENST00000620291 557 ntBASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC44A1Q8WWI5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC44A1Q8WWI5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.77■□□□□ 0.59
SLC44A1Q8WWI5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC44A1Q8WWI5 LTB4R2-202ENST00000528054 3092 ntBASIC18.77■□□□□ 0.59
SLC44A1Q8WWI5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SLC44A1Q8WWI5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC44A1Q8WWI5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC44A1Q8WWI5 KRT16P5-201ENST00000455284 522 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms