Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
U2AF1L4Q8WU68 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
U2AF1L4Q8WU68 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.39■■□□□ 1.01
U2AF1L4Q8WU68 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
U2AF1L4Q8WU68 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AL590627.1-203ENST00000421194 1026 ntBASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
U2AF1L4Q8WU68 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 TOB2P1-201ENST00000469761 992 ntBASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.37■■□□□ 1.01
U2AF1L4Q8WU68 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.36■■□□□ 1.01
U2AF1L4Q8WU68 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 KRT16P4-201ENST00000453883 522 ntBASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AC079602.3-201ENST00000623931 403 ntBASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AF228730.7-201ENST00000641842 219 ntBASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AC116562.4-201ENST00000641316 2276 ntBASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
U2AF1L4Q8WU68 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms