Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 CD99P1-205ENST00000527459 561 ntBASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLHC1Q8NHS4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 AL133373.2-201ENST00000623187 2828 ntBASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
CLHC1Q8NHS4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 AC091390.4-202ENST00000476426 537 ntBASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 MTMR9LP-203ENST00000426597 1545 ntBASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 AL354751.1-201ENST00000412768 1863 ntBASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLHC1Q8NHS4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.96■□□□□ 0.47
CLHC1Q8NHS4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms