Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.29■□□□□ 0.04
LRTM2Q8N967 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRTM2Q8N967 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 AL645608.8-201ENST00000606034 2086 ntBASIC15.28■□□□□ 0.04
LRTM2Q8N967 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 MIR6821-201ENST00000617625 74 ntBASIC15.28■□□□□ 0.04
LRTM2Q8N967 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRTM2Q8N967 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.28■□□□□ 0.04
LRTM2Q8N967 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.27■□□□□ 0.04
LRTM2Q8N967 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 REXO1L9P-201ENST00000604264 2108 ntBASIC15.27■□□□□ 0.04
LRTM2Q8N967 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
LRTM2Q8N967 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRTM2Q8N967 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRTM2Q8N967 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.27■□□□□ 0.03
LRTM2Q8N967 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.27■□□□□ 0.03
LRTM2Q8N967 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
LRTM2Q8N967 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRTM2Q8N967 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms