Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 TEX21P-204ENST00000641479 1693 ntBASIC19.23■□□□□ 0.67
PAF1Q8N7H5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PAF1Q8N7H5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CCR12P-201ENST00000446203 998 ntBASIC19.22■□□□□ 0.67
PAF1Q8N7H5 AC128688.1-201ENST00000487626 519 ntBASIC19.22■□□□□ 0.67
PAF1Q8N7H5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 FLJ16779-201ENST00000612722 7638 ntBASIC19.22■□□□□ 0.67
PAF1Q8N7H5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.22■□□□□ 0.67
PAF1Q8N7H5 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 AC096733.2-201ENST00000609937 1394 ntBASIC19.21■□□□□ 0.67
PAF1Q8N7H5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 KRT8P9-201ENST00000558927 1449 ntBASIC19.21■□□□□ 0.67
PAF1Q8N7H5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PAF1Q8N7H5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.21■□□□□ 0.67
PAF1Q8N7H5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
PAF1Q8N7H5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 LINC01023-201ENST00000606054 436 ntBASIC19.2■□□□□ 0.66
PAF1Q8N7H5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 AC116562.4-202ENST00000641738 218 ntBASIC19.2■□□□□ 0.66
PAF1Q8N7H5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.2■□□□□ 0.66
PAF1Q8N7H5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms