Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPSF7Q8N684 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPSF7Q8N684 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.3■□□□□ 0.52
CPSF7Q8N684 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 AC133681.1-201ENST00000465482 601 ntBASIC18.3■□□□□ 0.52
CPSF7Q8N684 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPSF7Q8N684 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.3■□□□□ 0.52
CPSF7Q8N684 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 SNORA78-201ENST00000459373 127 ntBASIC18.29■□□□□ 0.52
CPSF7Q8N684 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 MIR4497-201ENST00000583208 89 ntBASIC18.29■□□□□ 0.52
CPSF7Q8N684 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.29■□□□□ 0.52
CPSF7Q8N684 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPSF7Q8N684 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 TSPY21P-201ENST00000433481 731 ntBASIC18.28■□□□□ 0.52
CPSF7Q8N684 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms