Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 BICD1-207ENST00000551848 1962 ntBASIC17.33■□□□□ 0.36
VRK2Q86Y07 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 AL390961.4-201ENST00000623958 2535 ntBASIC17.32■□□□□ 0.36
VRK2Q86Y07 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK2Q86Y07 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK2Q86Y07 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 FSCN1P1-201ENST00000568912 1481 ntBASIC17.31■□□□□ 0.36
VRK2Q86Y07 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 AL357033.4-201ENST00000617703 1807 ntBASIC17.31■□□□□ 0.36
VRK2Q86Y07 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 RCC2P3-201ENST00000418112 1537 ntBASIC17.31■□□□□ 0.36
VRK2Q86Y07 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK2Q86Y07 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.31■□□□□ 0.36
VRK2Q86Y07 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
VRK2Q86Y07 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VRK2Q86Y07 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.3■□□□□ 0.36
VRK2Q86Y07 GCSHP5-201ENST00000443090 522 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms