Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RUNDC3AQ59EK9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 AC090340.1-201ENST00000620778 4980 ntBASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 AC112777.1-201ENST00000540175 1423 ntBASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 AC135776.1-201ENST00000319817 2481 ntBASIC17.69■□□□□ 0.42
RUNDC3AQ59EK9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 AL357033.4-201ENST00000617703 1807 ntBASIC17.68■□□□□ 0.42
RUNDC3AQ59EK9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RUNDC3AQ59EK9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms