Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN12P56749 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN12P56749 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN12P56749 AC134043.2-201ENST00000624206 2238 ntBASIC16.29■□□□□ 0.2
CLDN12P56749 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN12P56749 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN12P56749 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN12P56749 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLDN12P56749 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN12P56749 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN12P56749 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN12P56749 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLDN12P56749 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN12P56749 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN12P56749 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN12P56749 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN12P56749 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN12P56749 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN12P56749 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
CLDN12P56749 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN12P56749 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
CLDN12P56749 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN12P56749 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN12P56749 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN12P56749 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN12P56749 TSPY21P-201ENST00000433481 731 ntBASIC16.27■□□□□ 0.2
CLDN12P56749 TSPY23P-201ENST00000440136 739 ntBASIC16.27■□□□□ 0.2
CLDN12P56749 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN12P56749 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN12P56749 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN12P56749 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN12P56749 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN12P56749 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CLDN12P56749 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CLDN12P56749 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CLDN12P56749 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CLDN12P56749 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN12P56749 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLDN12P56749 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN12P56749 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN12P56749 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CLDN12P56749 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN12P56749 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN12P56749 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN12P56749 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN12P56749 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN12P56749 HEIH-201ENST00000623091 1652 ntBASIC16.26■□□□□ 0.19
CLDN12P56749 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN12P56749 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLDN12P56749 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms