Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-1P43699 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX2-1P43699 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-1P43699 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-1P43699 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-1P43699 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NKX2-1P43699 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-1P43699 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-1P43699 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX2-1P43699 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-1P43699 PRORSD1P-202ENST00000563365 2154 ntBASIC15.34■□□□□ 0.05
NKX2-1P43699 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
NKX2-1P43699 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NKX2-1P43699 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.33■□□□□ 0.05
NKX2-1P43699 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-1P43699 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NKX2-1P43699 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-1P43699 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
NKX2-1P43699 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NKX2-1P43699 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-1P43699 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX2-1P43699 AL162430.1-201ENST00000480705 870 ntBASIC15.33■□□□□ 0.04
NKX2-1P43699 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.33■□□□□ 0.04
NKX2-1P43699 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.33■□□□□ 0.04
NKX2-1P43699 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-1P43699 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NKX2-1P43699 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 AC012313.1-201ENST00000593393 3059 ntBASIC15.33■□□□□ 0.04
NKX2-1P43699 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 OR6D1P-203ENST00000641209 4860 ntBASIC15.33■□□□□ 0.04
NKX2-1P43699 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-1P43699 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 AC134043.2-201ENST00000624206 2238 ntBASIC15.33■□□□□ 0.04
NKX2-1P43699 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.33■□□□□ 0.04
NKX2-1P43699 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NKX2-1P43699 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 LINC00896-202ENST00000609602 2128 ntBASIC15.32■□□□□ 0.04
NKX2-1P43699 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-1P43699 AC139713.2-201ENST00000641328 2723 ntBASIC15.32■□□□□ 0.04
NKX2-1P43699 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.32■□□□□ 0.04
NKX2-1P43699 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
NKX2-1P43699 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
NKX2-1P43699 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX2-1P43699 AL512625.2-201ENST00000417533 625 ntBASIC15.32■□□□□ 0.04
NKX2-1P43699 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-1P43699 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.32■□□□□ 0.04
NKX2-1P43699 AC005829.2-201ENST00000571422 1056 ntBASIC15.32■□□□□ 0.04
NKX2-1P43699 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NKX2-1P43699 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NKX2-1P43699 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NKX2-1P43699 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.32■□□□□ 0.04
NKX2-1P43699 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NKX2-1P43699 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
NKX2-1P43699 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX2-1P43699 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.31■□□□□ 0.04
NKX2-1P43699 TSPY21P-201ENST00000433481 731 ntBASIC15.31■□□□□ 0.04
NKX2-1P43699 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.31■□□□□ 0.04
NKX2-1P43699 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.31■□□□□ 0.04
NKX2-1P43699 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NKX2-1P43699 AC005181.1-201ENST00000604782 1256 ntBASIC15.31■□□□□ 0.04
NKX2-1P43699 AC231657.2-201ENST00000624556 255 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms