Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.97■■□□□ 1.11
TOP1P11387 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TOP1P11387 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.97■■□□□ 1.11
TOP1P11387 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.97■■□□□ 1.11
TOP1P11387 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.96■■□□□ 1.11
TOP1P11387 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
TOP1P11387 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.96■■□□□ 1.11
TOP1P11387 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.96■■□□□ 1.11
TOP1P11387 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.96■■□□□ 1.11
TOP1P11387 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.96■■□□□ 1.11
TOP1P11387 NTF6B-201ENST00000591913 560 ntBASIC21.96■■□□□ 1.11
TOP1P11387 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
TOP1P11387 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.96■■□□□ 1.11
TOP1P11387 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.96■■□□□ 1.11
TOP1P11387 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TOP1P11387 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.96■■□□□ 1.11
TOP1P11387 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TOP1P11387 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
TOP1P11387 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TOP1P11387 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TOP1P11387 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.95■■□□□ 1.1
TOP1P11387 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.95■■□□□ 1.1
TOP1P11387 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
TOP1P11387 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.95■■□□□ 1.1
TOP1P11387 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.95■■□□□ 1.1
TOP1P11387 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.95■■□□□ 1.1
TOP1P11387 FAM8A6P-201ENST00000407496 1135 ntBASIC21.95■■□□□ 1.1
TOP1P11387 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.95■■□□□ 1.1
TOP1P11387 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.95■■□□□ 1.1
TOP1P11387 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.95■■□□□ 1.1
TOP1P11387 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.95■■□□□ 1.1
TOP1P11387 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.95■■□□□ 1.1
TOP1P11387 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TOP1P11387 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 AC120498.9-201ENST00000339021 3867 ntBASIC21.95■■□□□ 1.1
TOP1P11387 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.95■■□□□ 1.1
TOP1P11387 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP1P11387 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 AC008556.1-201ENST00000610908 2040 ntBASIC21.94■■□□□ 1.1
TOP1P11387 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.94■■□□□ 1.1
TOP1P11387 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.94■■□□□ 1.1
TOP1P11387 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.94■■□□□ 1.1
TOP1P11387 LINC01238-205ENST00000567549 1107 ntBASIC21.94■■□□□ 1.1
TOP1P11387 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.94■■□□□ 1.1
TOP1P11387 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.94■■□□□ 1.1
TOP1P11387 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TOP1P11387 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TOP1P11387 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TOP1P11387 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP1P11387 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.93■■□□□ 1.1
TOP1P11387 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP1P11387 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP1P11387 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms