Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.61■□□□□ 0.73
TRUB2O95900 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.61■□□□□ 0.73
TRUB2O95900 AC005363.2-201ENST00000618631 242 ntBASIC19.61■□□□□ 0.73
TRUB2O95900 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRUB2O95900 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.61■□□□□ 0.73
TRUB2O95900 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRUB2O95900 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 RCC2P3-201ENST00000418112 1537 ntBASIC19.61■□□□□ 0.73
TRUB2O95900 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.61■□□□□ 0.73
TRUB2O95900 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRUB2O95900 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRUB2O95900 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRUB2O95900 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.6■□□□□ 0.73
TRUB2O95900 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.6■□□□□ 0.73
TRUB2O95900 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRUB2O95900 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRUB2O95900 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.6■□□□□ 0.73
TRUB2O95900 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.59■□□□□ 0.73
TRUB2O95900 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.59■□□□□ 0.73
TRUB2O95900 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
TRUB2O95900 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 AC113347.1-201ENST00000413321 391 ntBASIC19.59■□□□□ 0.73
TRUB2O95900 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRUB2O95900 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
TRUB2O95900 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.59■□□□□ 0.73
TRUB2O95900 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.59■□□□□ 0.73
TRUB2O95900 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.59■□□□□ 0.73
TRUB2O95900 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRUB2O95900 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.58■□□□□ 0.73
TRUB2O95900 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.58■□□□□ 0.73
TRUB2O95900 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRUB2O95900 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.58■□□□□ 0.73
TRUB2O95900 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRUB2O95900 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRUB2O95900 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.58■□□□□ 0.72
TRUB2O95900 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.58■□□□□ 0.72
TRUB2O95900 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRUB2O95900 MCCD1P1-208ENST00000445732 328 ntBASIC19.58■□□□□ 0.72
TRUB2O95900 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.58■□□□□ 0.72
TRUB2O95900 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.58■□□□□ 0.72
TRUB2O95900 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.58■□□□□ 0.72
TRUB2O95900 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
TRUB2O95900 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.58■□□□□ 0.72
TRUB2O95900 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRUB2O95900 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 AL109659.2-201ENST00000606809 1674 ntBASIC19.57■□□□□ 0.72
TRUB2O95900 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.57■□□□□ 0.72
TRUB2O95900 AC010203.1-204ENST00000548782 407 ntBASIC19.57■□□□□ 0.72
TRUB2O95900 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRUB2O95900 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.57■□□□□ 0.72
TRUB2O95900 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms