Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.93■□□□□ 0.78
RCCD1A6NED2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCCD1A6NED2 LINC00896-202ENST00000609602 2128 ntBASIC19.93■□□□□ 0.78
RCCD1A6NED2 KRT8P45-201ENST00000414328 1447 ntBASIC19.93■□□□□ 0.78
RCCD1A6NED2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.92■□□□□ 0.78
RCCD1A6NED2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RCCD1A6NED2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RCCD1A6NED2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC008556.1-201ENST00000610908 2040 ntBASIC19.91■□□□□ 0.78
RCCD1A6NED2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.91■□□□□ 0.78
RCCD1A6NED2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RCCD1A6NED2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 AL023875.1-201ENST00000640777 796 ntBASIC19.9■□□□□ 0.78
RCCD1A6NED2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.9■□□□□ 0.78
RCCD1A6NED2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RCCD1A6NED2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms