Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 ANO7L1-203ENST00000602586 1720 ntBASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV30A0A087WSZ9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 KRT8P41-201ENST00000533985 1514 ntBASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 AL353807.1-201ENST00000427475 662 ntBASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 KRT18P6-201ENST00000555540 1265 ntBASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 MYC-208ENST00000641036 567 ntBASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 AL139384.1-201ENST00000612143 3047 ntBASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV30A0A087WSZ9 PCDHB18P-201ENST00000524813 2368 ntBASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV30A0A087WSZ9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms