Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 GCSHP5-201ENST00000443090 522 ntBASIC21.42■■□□□ 1.02
CLIC4Q9Y696 AL158047.1-201ENST00000445918 881 ntBASIC21.42■■□□□ 1.02
CLIC4Q9Y696 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 AP000692.2-201ENST00000608391 879 ntBASIC21.42■■□□□ 1.02
CLIC4Q9Y696 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.41■■□□□ 1.02
CLIC4Q9Y696 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 FSCN1P1-201ENST00000568912 1481 ntBASIC21.41■■□□□ 1.02
CLIC4Q9Y696 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC4Q9Y696 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC4Q9Y696 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.39■■□□□ 1.02
CLIC4Q9Y696 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 RPS2P55-201ENST00000397318 883 ntBASIC21.39■■□□□ 1.01
CLIC4Q9Y696 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 AC107956.1-201ENST00000494359 873 ntBASIC21.39■■□□□ 1.01
CLIC4Q9Y696 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.39■■□□□ 1.01
CLIC4Q9Y696 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC4Q9Y696 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms