Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 AC087499.1-201ENST00000418141 1075 ntBASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 KRT8P11-201ENST00000409686 1436 ntBASIC17.97■□□□□ 0.47
NECTIN3Q9NQS3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 AL032819.2-201ENST00000624543 2162 ntBASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 CROCCP3-202ENST00000420820 1947 ntBASIC17.96■□□□□ 0.47
NECTIN3Q9NQS3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
NECTIN3Q9NQS3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
NECTIN3Q9NQS3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NECTIN3Q9NQS3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 TSPY23P-201ENST00000440136 739 ntBASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 MFAP1P1-201ENST00000442257 1255 ntBASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 AP005242.2-201ENST00000580065 1175 ntBASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NECTIN3Q9NQS3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms