Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 CROCCP3-202ENST00000420820 1947 ntBASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 AC135050.7-201ENST00000624508 2218 ntBASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MIR5787-201ENST00000611784 55 ntBASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.29■□□□□ 0.2
C12orf4Q9NQ89 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 AC018695.7-201ENST00000624587 2492 ntBASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 BX276092.2-201ENST00000417668 665 ntBASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 AC005829.2-201ENST00000571422 1056 ntBASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.28■□□□□ 0.2
C12orf4Q9NQ89 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AC004911.1-201ENST00000416316 871 ntBASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AF201337.1-201ENST00000520239 748 ntBASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AC105036.2-201ENST00000569468 176 ntBASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf4Q9NQ89 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf4Q9NQ89 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.27■□□□□ 0.19
C12orf4Q9NQ89 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.27■□□□□ 0.19
C12orf4Q9NQ89 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms