Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 FES-204ENST00000414248 2327 ntTSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 AC138028.4-201ENST00000564984 1845 ntBASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 AC100803.2-201ENST00000562459 1963 ntBASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CYSTM1Q9H1C7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 HCG11-201ENST00000411553 5696 ntBASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AC009237.14-201ENST00000609975 1594 ntBASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CYSTM1Q9H1C7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms