Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPPED1Q9BRF8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 KRT8P45-201ENST00000414328 1447 ntBASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 AC135776.1-201ENST00000319817 2481 ntBASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CPPED1Q9BRF8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 AL357033.4-201ENST00000617703 1807 ntBASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 KRASP1-201ENST00000407852 552 ntBASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 AL445675.2-201ENST00000620291 557 ntBASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 MYC-208ENST00000641036 567 ntBASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 AC112777.1-201ENST00000540175 1423 ntBASIC17.64■□□□□ 0.41
CPPED1Q9BRF8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 KRT16P5-201ENST00000455284 522 ntBASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.63■□□□□ 0.41
CPPED1Q9BRF8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 KRT17P3-201ENST00000420566 1262 ntBASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 AL023875.1-201ENST00000640777 796 ntBASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.62■□□□□ 0.41
CPPED1Q9BRF8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms