Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
CALR3Q96L12 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.83■□□□□ 0.77
CALR3Q96L12 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 AC020916.1-201ENST00000587762 1774 ntBASIC19.83■□□□□ 0.77
CALR3Q96L12 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 AC126763.1-201ENST00000552015 2118 ntBASIC19.83■□□□□ 0.77
CALR3Q96L12 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CALR3Q96L12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CALR3Q96L12 AC020763.4-201ENST00000623414 4170 ntBASIC19.83■□□□□ 0.76
CALR3Q96L12 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.83■□□□□ 0.76
CALR3Q96L12 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.83■□□□□ 0.76
CALR3Q96L12 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CALR3Q96L12 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.82■□□□□ 0.76
CALR3Q96L12 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.82■□□□□ 0.76
CALR3Q96L12 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CALR3Q96L12 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CALR3Q96L12 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CALR3Q96L12 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CALR3Q96L12 NIFKP9-201ENST00000419265 221 ntBASIC19.82■□□□□ 0.76
CALR3Q96L12 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CALR3Q96L12 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.82■□□□□ 0.76
CALR3Q96L12 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.82■□□□□ 0.76
CALR3Q96L12 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.82■□□□□ 0.76
CALR3Q96L12 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CALR3Q96L12 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 AC004980.1-204ENST00000429707 299 ntBASIC19.81■□□□□ 0.76
CALR3Q96L12 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CALR3Q96L12 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
CALR3Q96L12 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.81■□□□□ 0.76
CALR3Q96L12 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CALR3Q96L12 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.81■□□□□ 0.76
CALR3Q96L12 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALR3Q96L12 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALR3Q96L12 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms