Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMO3Q8TAP4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 AC010947.1-201ENST00000623454 693 ntBASIC20.1■□□□□ 0.81
LMO3Q8TAP4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.1■□□□□ 0.81
LMO3Q8TAP4 AC135050.7-201ENST00000624508 2218 ntBASIC20.1■□□□□ 0.81
LMO3Q8TAP4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMO3Q8TAP4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 MIR3180-5-201ENST00000583743 153 ntBASIC20.08■□□□□ 0.81
LMO3Q8TAP4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.08■□□□□ 0.81
LMO3Q8TAP4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LMO3Q8TAP4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 AC120498.9-201ENST00000339021 3867 ntBASIC20.07■□□□□ 0.8
LMO3Q8TAP4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
LMO3Q8TAP4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 MMP23A-201ENST00000234610 1017 ntBASIC20.06■□□□□ 0.8
LMO3Q8TAP4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.06■□□□□ 0.8
LMO3Q8TAP4 MYLKP1-201ENST00000509077 1580 ntBASIC20.06■□□□□ 0.8
LMO3Q8TAP4 EGLN1P1-201ENST00000531623 762 ntBASIC20.06■□□□□ 0.8
LMO3Q8TAP4 AC036111.1-201ENST00000533973 1582 ntBASIC20.06■□□□□ 0.8
LMO3Q8TAP4 C2orf69P3-201ENST00000565542 1120 ntBASIC20.06■□□□□ 0.8
LMO3Q8TAP4 CR769767.2-201ENST00000622735 460 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms