Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 AC133681.1-201ENST00000465482 601 ntBASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 MTDHP1-201ENST00000605323 784 ntBASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 AC068880.1-201ENST00000507289 2297 ntBASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFCAB3Q8N7B9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ACTG1P22-201ENST00000603793 1099 ntBASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 AL121829.2-201ENST00000620908 328 ntBASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFCAB3Q8N7B9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 KRASP1-201ENST00000407852 552 ntBASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 PRKY-204ENST00000533551 1019 ntBASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 AC141586.3-201ENST00000562166 1838 ntBASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EFCAB3Q8N7B9 AL031598.1-201ENST00000561511 1773 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms