Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK2Q86Y07 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK2Q86Y07 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK2Q86Y07 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 AC135050.7-201ENST00000624508 2218 ntBASIC17.36■□□□□ 0.37
VRK2Q86Y07 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK2Q86Y07 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VRK2Q86Y07 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
VRK2Q86Y07 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 AC098590.1-201ENST00000468126 897 ntBASIC17.35■□□□□ 0.37
VRK2Q86Y07 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK2Q86Y07 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
VRK2Q86Y07 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 MESTP1-201ENST00000404287 994 ntBASIC17.34■□□□□ 0.37
VRK2Q86Y07 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK2Q86Y07 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.34■□□□□ 0.37
VRK2Q86Y07 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK2Q86Y07 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.33■□□□□ 0.37
VRK2Q86Y07 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK2Q86Y07 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VRK2Q86Y07 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK2Q86Y07 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.33■□□□□ 0.37
VRK2Q86Y07 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VRK2Q86Y07 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK2Q86Y07 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
VRK2Q86Y07 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VRK2Q86Y07 AL158047.1-201ENST00000445918 881 ntBASIC17.33■□□□□ 0.36
VRK2Q86Y07 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.33■□□□□ 0.36
VRK2Q86Y07 CD177P1-201ENST00000606252 935 ntBASIC17.33■□□□□ 0.36
VRK2Q86Y07 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms