Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 AL121829.2-201ENST00000620908 328 ntBASIC16.69■□□□□ 0.26
LRRC28Q86X40 AP006294.2-201ENST00000641667 209 ntBASIC16.69■□□□□ 0.26
LRRC28Q86X40 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC28Q86X40 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC28Q86X40 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 UBE2SP1-201ENST00000450587 669 ntBASIC16.68■□□□□ 0.26
LRRC28Q86X40 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 FAM197Y4-202ENST00000622692 608 ntBASIC16.68■□□□□ 0.26
LRRC28Q86X40 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LRRC28Q86X40 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LRRC28Q86X40 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 PRORSD1P-202ENST00000563365 2154 ntBASIC16.67■□□□□ 0.26
LRRC28Q86X40 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 PRKY-204ENST00000533551 1019 ntBASIC16.67■□□□□ 0.26
LRRC28Q86X40 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 AL162741.1-201ENST00000565563 1558 ntBASIC16.67■□□□□ 0.26
LRRC28Q86X40 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LRRC28Q86X40 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LRRC28Q86X40 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LRRC28Q86X40 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LRRC28Q86X40 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms