Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 FSCN1P1-201ENST00000568912 1481 ntBASIC16.55■□□□□ 0.24
RTTNQ86VV8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 AC096733.2-201ENST00000609937 1394 ntBASIC16.55■□□□□ 0.24
RTTNQ86VV8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.55■□□□□ 0.24
RTTNQ86VV8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 FAM207BP-201ENST00000447172 505 ntBASIC16.54■□□□□ 0.24
RTTNQ86VV8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 WWOX-216ENST00000569818 525 ntBASIC16.54■□□□□ 0.24
RTTNQ86VV8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 AC026396.1-201ENST00000419388 421 ntBASIC16.54■□□□□ 0.24
RTTNQ86VV8 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RTTNQ86VV8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RTTNQ86VV8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 AC018470.1-201ENST00000624790 3129 ntBASIC16.53■□□□□ 0.24
RTTNQ86VV8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 AC087388.1-201ENST00000571370 1112 ntBASIC16.53■□□□□ 0.24
RTTNQ86VV8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 AL512353.2-201ENST00000448759 1962 ntBASIC16.53■□□□□ 0.24
RTTNQ86VV8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.53■□□□□ 0.24
RTTNQ86VV8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTTNQ86VV8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.52■□□□□ 0.24
RTTNQ86VV8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.52■□□□□ 0.24
RTTNQ86VV8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms