Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 AC142381.4-202ENST00000563973 229 ntBASIC21.18■□□□□ 0.98
SHC4Q6S5L8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHC4Q6S5L8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 GCSHP5-201ENST00000443090 522 ntBASIC21.17■□□□□ 0.98
SHC4Q6S5L8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 KRT8P45-201ENST00000414328 1447 ntBASIC21.17■□□□□ 0.98
SHC4Q6S5L8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHC4Q6S5L8 AL133373.2-201ENST00000623187 2828 ntBASIC21.17■□□□□ 0.98
SHC4Q6S5L8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 AC116562.2-201ENST00000507042 360 ntBASIC21.16■□□□□ 0.98
SHC4Q6S5L8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 AC008556.1-201ENST00000610908 2040 ntBASIC21.16■□□□□ 0.98
SHC4Q6S5L8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SHC4Q6S5L8 ABALON-201ENST00000629058 1903 ntBASIC21.16■□□□□ 0.98
SHC4Q6S5L8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 AC096733.2-201ENST00000609937 1394 ntBASIC21.15■□□□□ 0.98
SHC4Q6S5L8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.15■□□□□ 0.98
SHC4Q6S5L8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHC4Q6S5L8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.14■□□□□ 0.98
SHC4Q6S5L8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.14■□□□□ 0.98
SHC4Q6S5L8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHC4Q6S5L8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.14■□□□□ 0.98
SHC4Q6S5L8 AL135905.2-201ENST00000584934 1404 ntBASIC21.14■□□□□ 0.98
SHC4Q6S5L8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
SHC4Q6S5L8 RPS2P55-201ENST00000397318 883 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms