Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
UBXN1Q04323 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 MTMR9LP-203ENST00000426597 1545 ntBASIC20.57■□□□□ 0.88
UBXN1Q04323 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.57■□□□□ 0.88
UBXN1Q04323 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.57■□□□□ 0.88
UBXN1Q04323 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBXN1Q04323 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
UBXN1Q04323 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.56■□□□□ 0.88
UBXN1Q04323 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBXN1Q04323 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.56■□□□□ 0.88
UBXN1Q04323 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
UBXN1Q04323 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.56■□□□□ 0.88
UBXN1Q04323 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBXN1Q04323 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.56■□□□□ 0.88
UBXN1Q04323 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
UBXN1Q04323 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBXN1Q04323 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
UBXN1Q04323 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBXN1Q04323 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UBXN1Q04323 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBXN1Q04323 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
UBXN1Q04323 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.55■□□□□ 0.88
UBXN1Q04323 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.55■□□□□ 0.88
UBXN1Q04323 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.55■□□□□ 0.88
UBXN1Q04323 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.55■□□□□ 0.88
UBXN1Q04323 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.55■□□□□ 0.88
UBXN1Q04323 AC068587.9-201ENST00000641814 219 ntBASIC20.55■□□□□ 0.88
UBXN1Q04323 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.55■□□□□ 0.88
UBXN1Q04323 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBXN1Q04323 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UBXN1Q04323 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBXN1Q04323 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.54■□□□□ 0.88
UBXN1Q04323 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.54■□□□□ 0.88
UBXN1Q04323 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBXN1Q04323 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.54■□□□□ 0.88
UBXN1Q04323 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.54■□□□□ 0.88
UBXN1Q04323 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
UBXN1Q04323 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBXN1Q04323 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.54■□□□□ 0.88
UBXN1Q04323 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.53■□□□□ 0.88
UBXN1Q04323 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBXN1Q04323 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.53■□□□□ 0.88
UBXN1Q04323 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
UBXN1Q04323 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBXN1Q04323 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBXN1Q04323 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
UBXN1Q04323 NOC2LP2-201ENST00000407594 1944 ntBASIC20.53■□□□□ 0.88
UBXN1Q04323 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBXN1Q04323 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.53■□□□□ 0.88
UBXN1Q04323 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms