Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
RPS4XP62701 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPS4XP62701 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.95■□□□□ 0.3
RPS4XP62701 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.95■□□□□ 0.3
RPS4XP62701 AL031985.4-201ENST00000642138 673 ntBASIC16.95■□□□□ 0.3
RPS4XP62701 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.95■□□□□ 0.3
RPS4XP62701 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.95■□□□□ 0.3
RPS4XP62701 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPS4XP62701 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
RPS4XP62701 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.94■□□□□ 0.3
RPS4XP62701 UNC93B2-201ENST00000285383 730 ntBASIC16.94■□□□□ 0.3
RPS4XP62701 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RPS4XP62701 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.94■□□□□ 0.3
RPS4XP62701 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPS4XP62701 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPS4XP62701 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
RPS4XP62701 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPS4XP62701 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS4XP62701 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPS4XP62701 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 RCN1P1-201ENST00000400413 996 ntBASIC16.93■□□□□ 0.3
RPS4XP62701 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.93■□□□□ 0.3
RPS4XP62701 AC008040.2-201ENST00000461049 708 ntBASIC16.93■□□□□ 0.3
RPS4XP62701 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.93■□□□□ 0.3
RPS4XP62701 CKBP1-201ENST00000565489 1086 ntBASIC16.93■□□□□ 0.3
RPS4XP62701 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 AC011298.2-201ENST00000617989 482 ntBASIC16.93■□□□□ 0.3
RPS4XP62701 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS4XP62701 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPS4XP62701 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.93■□□□□ 0.3
RPS4XP62701 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPS4XP62701 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.93■□□□□ 0.3
RPS4XP62701 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.93■□□□□ 0.3
RPS4XP62701 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPS4XP62701 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 AC126763.1-201ENST00000552015 2118 ntBASIC16.92■□□□□ 0.3
RPS4XP62701 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.92■□□□□ 0.3
RPS4XP62701 AC130371.2-201ENST00000619443 611 ntBASIC16.92■□□□□ 0.3
RPS4XP62701 CR392000.1-201ENST00000624770 1228 ntBASIC16.92■□□□□ 0.3
RPS4XP62701 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RPS4XP62701 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RPS4XP62701 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RPS4XP62701 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RPS4XP62701 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms